bioSkills
A skill set for AI coding agents performing bioinformatics tasks.
- Type
- Agent Skill
- Open source
- Yes
- GitHub Stars
- ★ 1.0k
- Source
- skill-github
- Repository
- github.com/GPTomics/bioSkills
Overview
bioSkills is a collection of skills designed for AI coding agents (such as Claude Code, OpenAI Codex, etc.) to guide them through common bioinformatics workflows. Each skill includes code patterns, best practices, and examples to help agents generate correct and idiomatic code. Suitable for users ranging from undergraduates to PhD researchers, covering topics from basic sequence operations to advanced analyses like single-cell RNA-seq and population genetics.
Capabilities
- ▪Basic sequence operations
- ▪Single-cell RNA-seq analysis
- ▪Population genetics analysis
- ▪Differential expression analysis
- ▪Pathway analysis
Use cases
Setup
git clone git@github.com:GPTomics/bioSkills.git && cd bioSkills && ./install-claude.sh --project /path/to/project
This information was compiled by AI from public sources and may contain inaccuracies — please refer to the source.
FAQ
How do I install skills for specific categories?
Use the command `./install-claude.sh --categories "single-cell,variant-calling"`.
Do I need a specific version of Python?
Yes, Python 3.9 or higher is required.
Which AI coding agents are supported?
Supports Claude Code, OpenAI Codex, Google Gemini, and others.
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